Para-cresol production by Clostridium difficile affects microbial diversity and membrane integrity of Gram-negative bacteriaI.J. Passmore, M.P.M. Letertre,
M.D. Preston, I. Bianconi, M.A. Harrison, F. Nasher, H. Kaur, H.A. Hong, S.D. Baines, S.M. Cutting, J.R. Swann, B.W. Wren, L.F. Dawson
2018 PLoS Pathogens
10.1371/journal.ppat.1007191
Pathways-wide genetic risks in Chlamydial infections overlap between tissue tropisms: A genome-wide association scanC.h. Roberts, S. Ouberg,
M.D. Preston, H.J.C. de Vries, M.J. Holland, S.A. Morre
2018 Mediators of Inflammation
10.1101/205286
Frequent Undetected Ward-Based Methicillin-Resistant Staphylococcus aureus Transmission Linked to Patient Sharing Between HospitalsO. Tosas Auguet, R.A. Stabler, J. Betley
M.D. Preston, M. Dhaliwal, M. Gaunt, A. Ioannou, N. Desai, T. Karadag, R. Batra, J.A. Otter, H. Marbach, T.G. Clark, J.D. Edgeworth
2018 Clinical Infectious Diseases
10.1093/cid/cix901
Comparative genome analysis and global phylogeny of the toxin variant Clostridium difficile PCR ribotype 017 reveals the evolution of two independent sublineagesM.D. Cairns,
M.D. Preston, C.L. Hall, D.N. Gerding, P.M. Hawkey, H. Kato, H. Kim, E.J. Kuijper, T.D. Lawley, H. Pituch, S. Reid, B. Kullin, T.V. Riley, K. Solomon, P.J. Tsai, J.S. Weese, R.A. Stabler, B.W. Wren
2017 J. Clinical Microbiology
10.1128/JCM.01296-16
The nature of the conserved basic amino acid sequences found among 437 heparin binding proteins determined by network analysisT.R. Rudd,
M.D. Preston, E.A. Yates
2017 Molecular BioSystems
10.1039/C6MB00857G
From FASTQ to Function: In Silico Methods for Processing Next-Generation Sequencing DataM.D. Preston, R.A. Stabler
2016 Clostridium difficile: Methods and Protocols
10.1007/978-1-4939-6361-4_3
Development of a candidate reference material for adventitious virus detection in vaccine and biologicals manufacturing by deep sequencingE.T. Mee,
M.D. Preston, P.D. Minor, S. Schepelmann, CSS Participants
2016 Vaccine
10.1016/j.vaccine.2015.12.020
Conjunctival fibrosis and the innate barriers to Chlamydia trachomatis intracellular infection: a genome wide association studyC.h. Roberts, C. S. Franklin, P. Makalo, H. Joof, I. Sarr, O.S. Mahdi, A. Sillah, M. Bah, F. Payne, A.E. Jeffreys, W. Bottomley, A. Natividad, S. Molina-Gonzalez, S.E. Burr,
M.D. Preston, D. Kwiatkowski, K.A. Rockett, T.G. Clark, M.J. Burton, D.C.W. Mabey, R. Bailey, I.S. Barros, . J. Holland
2015 Nature Scientific Reports
10.1038/srep17447
Population genomic structure and adaptation in the zoonotic malaria parasite Plasmodium knowlesiS.A. Assefa, C. Lim,
M.D. Preston, C.W. Duffy, M.B. Nair, S.A. Adroub, K.A. Kadir, J.M. Goldberg, D.E. Neafsey, P. Divis, T.G. Clark, M.T. Duraisingh, D.J. Conway, A. Pain, B. Singh
2015 Proceedings of the National Academy of Sciences
10.1073/pnas.1509534112
Impact of individual movement and changing resource availability on male-female encounter rates in an herbivorous insectM.D. Preston, M.L. Forister, J.W. Pitchford, P.A. Armsworth
2015 Ecological Complexity
10.1016/j.ecocom.2015.07.004
Genomic epidemiology of a protracted hospital outbreak caused by a toxin A negative, Clostridium difficile sublineage PCR Ribotype 017 strain in London, England.M.D. Cairns,
M.D. Preston, T.D. Lawley, T.G. Clark, R.A. Stabler, B.W. Wren
2015 J. Clinical Microbiology
10.1128/JCM.00648-15
Rapid determination of anti-tuberculosis drug resistance from whole-genome sequencesF. Coll, R. McNerney,
M.D. Preston, J.A. Guerra-Assuncaol, A. Warry, G. Hill-Cawthrone, K. Mallard, M. Nair, A. Miranda, A. Alves, J. Perdigao, M. Voveoros, I. Portugal, Z. Hasan, R. Hasan, J.R. Glynn, N. Martin, A. Pain, T.G. Clark
2015 Genome Medicine
10.1186/s13073-015-0164-0
Imputation-based population genetics analysis of Plasmodium falciparum malaria parasitesH. Samad, F. Coll,
M.D. Preston, H. Ocholla, R.M. Fairhurst, T.G. Clark
2015 PLoS Genetic
10.1371/journal.pgen.1005131
On a singular initial-value problem for the Navier-Stokes equationsL.E. Fraenkel,
M.D. Preston2015 Mathematika
10.1112/S0025579314000333
Whole-genome scans provide evidence of adaptive evolution in Malawian Plasmodium falciparum isolatesH. Ocholla,
M.D. Preston, M. Mipando, A.T. Jensen, S. Campino, B. MacInnis, D. Alcock, A. Terlouw, I. Zongo, J-B. Oudraogo, A. Djimda, S.A. Assefa, O. Doumbo, S. Borrmann, A. Nzila, K. Marsh, R.M. Fairhurst, F. Nosten, T.J. Anderson, D.P. Kwiatkowski, A. Craig, T.G. Clark, J. Montgomery
2014 J. Infectious Diseases
10.1093/infdis/jiu349
A barcode of organellar genome polymorphisms identifies the geographic origin of Plasmodium falciparum strainsM.D. Preston, S. Campino, S.A. Assefa, D. Echeverry, H. Ocholla, A. Amambua-Ngwa, L.B. Stewart, D.J. Conway, S. Borrmann, P. Michon, I. Zongo, J-B. Ouedraogo, A. Djimda, O. Doumbo, F. Nosten, A. Pain, T. Bousema, C.J. Drakeley, R.M. Fairhurst, C.J. Sutherland, C. Roper T.G. Clark
2014 Nature Communications
10.1038/ncomms5052
SVAMP: Sequence variation analysis, maps and phylogenyR. Naeem, L. Hidayah,
M.D. Preston, T.G. Clark, A. Pain
2014 Bioinformatics
10.1093/bioinformatics/btu176
PolyTB: A genomic variation map for Mycobacterium tuberculosisF. Coll,
M.D. Preston, J.A. Guerra-Assuncao, G. Hill-Cawthorn, D. Harris, J. Perdigao, M. Viveiros, I. Portugal, F. Drobniewski, S. Gagneux, J.R. Glynn, A. Pain, J. Parkhill, R. McNerney, N. Martin, T.G. Clark
2014 Tuberculosis
10.1016/j.tube.2014.02.005
PlasmoView: A web-based resourse to visualise global Plasmodium falciparum genomic variationM.D. Preston, S.A. Assefa, H. Ocholla, C.J Sutherland, S. Borrmann, A. Nzila, P. Michon, TT Hien, T Bousema, C.J. Drakeley, I. Zongo, J.B. Ouedraogo, A.A. Djimde, O.K. Doumbo, F. Nosten, R.M. Fairhurst, D.J. Conway, C. Roper, T.G. Clark
2013 J. Infectious Diseases
10.1093/infdis/jit812
Using family-based designs for detecting rare variant disease associationsM.D. Preston, F. Dudbridge
2013 Annals of Human Genetics
10.1111/ahg.12051
EstMoi: Estimating multiplicity of infection using parasite deep sequencing dataS.A. Assefa,
M.D. Preston, S. Campino, H. Ocholla, C.J. Sutherland, T.G. Clark
2013 Bioinformatics
10.1093/bioinformatics/btu005
Elucidating Emergence and Transmission of Multidrug-Resistant Tuberculosis in Treatment Experienced Patients by Whole Genome SequencingT.G. Clark, K. Mallard, F. Coll,
M.D. Preston, S.A. Assefa, D. Harris, S. Ogwang, F. Mumbowa, B. Kirenga, D.M. O'Sullivan, A. Okwera, K.D. Eisenach, M. Joloba, S.D. Bentley, J.J. Ellner, J. Parkhill, E.C. Jones-Lopez, R. McNerney
2013 Plos One
10.1371/journal.pone.0083012
Dystromirs as serum biomarkers for monitoring the disease severity in Duchenne Muscular DystrophyI.T. Zaharieva, M. Calissano, M. Scoto,
M.D. Preston, S. Cirak, L. Feng, J. Collins, R. Kole, M. Guglieri, V. Straub, K. Bushby, A. Ferlini, J.E. Morgan, F. Muntoni
2013 Plos One
10.1371/journal.pone.0080263
SpolPred: Rapid and accurate prediction of Mycobacterium tuberculosis spoligotypes from short genomic sequencesF. Coll, K. Mallard,
M.D. Preston, S. Bentley, J. Parkhill, R. McNerney, N. Martin, T.G. Clark
2012 Bioinformatics
10.1093/bioinformatics/bts544
VarB: A variation browsing tool for polymorphisms derived from next-generation sequence dataM.D. Preston, H.M. Manske
et al.2012 Bioinformatics
10.1093/bioinformatics/bts557
A Nyström method for a boundary value problem arising in unsteady water wave problemsM.D. Preston, S.N. Chandler-Wilde, P.G. Chamberlain
2011 IMA: J. Numerical Analysis
10.1093/imanum/drq009
Evolutionary optimality in stochastic search problemsM.D. Preston, J.W. Pitchford, A.J. Wood
2010 J. Royal Society Interface
10.1098/rsif.2010.0090
An integral equation method for a boundary value problem arising in unsteady water wave problemsM.D. Preston, S.N. Chandler-Wilde, P.G. Chamberlain
2008 J. Integral Equations and Applications
10.1216/JIE-2008-20-1-121
Conferences
Poster: Butterfly mating, Won 3rd Prize in Poster Competition.M.D. Preston, J.W. Pitchford, P.R. Armsworth, M. Forrister
2012 UCL Computational Life and Medical Sciences Network Annual Symposium, London
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Paper: An integral equation method for a boundary value problem arising in unsteady water wave problemsM.D. Preston, S.N. Chandler-Wilde, P.G. Chamberlain
2005 Proc. of the UKBIM5, Liverpool